BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A02SP1|AL427694
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1188 0.0
>3x_Contig1776
Length = 26138
Score = 1188 bits (570), Expect = 0.0
Identities = 663/717 (92%), Gaps = 2/717 (0%)
Strand = Plus / Plus
Query: 190 gtwgtgattatgtgcaaacctacttctttatataagtttgttaccttggsgtgttattcg 249
|| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 7532 gttgtgattatgtgcaaacct-cttctttatataagtttgttaccttgacatcttattcc 7590
Query: 250 vgratgcctganaccgaatgggtgtaaatgagtaattatgcttagtkanttmggaacact 309
| |||||||| |||||||||||||||||||||||||||||||||| | || | ||||||
Sbjct: 7591 agaatgcctgaaaccgaatgggtgtaaatgagtaattatgcttagtaaattagcaacact 7650
Query: 310 tcacgattcatattatgkbkbkbkaattgasacccaagtsttacttgaagacaccattat 369
||||||||||||||||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 7651 tcacgattcatattatgaattgctaattgacacccaagtcttacttgaagacaccattat 7710
Query: 370 ggttcaattactattgacacacctcgtcgatgactgcctcagcaaaattacaattcatgc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7711 ggttcaattactattgacacacctcgtcgatgactgcctcagcaaaattacaattcatgc 7770
Query: 430 cggcaaaatgcttatatcmcgggatatttcamacttgagatactcgtsatgtagctgcat 489
|||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 7771 cggcaaaatgcttatatcacgggatatttcaaacttgagatactcgtcatgtagctgcat 7830
Query: 490 cttattactaatggrggaattacttattagccgttactctagttcgtmmyttcgagtctt 549
||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||
Sbjct: 7831 cttattactaatgcagcaattacttattagccgttactctagttc-taatttcgagtctt 7889
Query: 550 ttctagtccaaatctcattaactttcatagngtactattttctcttccttgtgtttgtcg 609
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 7890 ttctagtccaaatctcattaactttcatagcgtactattttctcttccttgtgtttgtcg 7949
Query: 610 ccaggcagacctcggaaaaagacttaamavgagacaatgagacaaaatttggagggatcg 669
||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||
Sbjct: 7950 ccaggcagacctcggaaaaagacttaaaaagacacaatgagacaaaatttggagggatcg 8009
Query: 670 gcaagactgamammgtagtcagamgtctccggcgaagagtamcctagamtmmcmmtggmm 729
|||||||||| | ||||||||| ||||||||||||||||| |||||| | |||
Sbjct: 8010 gcaagactgaaaaagtagtcagaagtctccggcgaagagtaacctagaataaaaatggaa 8069
Query: 730 mctmtggctmcttctgcaatagcggttcaaaggaagactttaagtttgacagtgtgtgga 789
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8070 actatggctacttctgcaatagcggttcaaaggaagactttaagtttgacagtgtgtgga 8129
Query: 790 gatactttctcggtatatctaccaagccttttatctgacgggtataatccggatttctct 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8130 gatactttctcggtatatctaccaagccttttatctgacgggtataatccggatttctct 8189
Query: 850 tcggattgcggtgaaatcaagggttgtctttgacagatamtggcactctcgatctcc 906
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8190 tcggattgcggtgaaatcaagggttgtctttgacagataatggcactctcgatctcc 8246
Score = 115 bits (55), Expect = 2e-25
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 atcgttattttggacgtcagtacttttttccttgatgactctttatmccgaaactacacg 60
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 7343 atcgttactttggacgtcagtacttttttccttgatgactctttatcccgaaactacacg 7402
Query: 61 a 61
|
Sbjct: 7403 a 7403
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.721 1.36
Gapped
Lambda K H
1.44 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3329
Number of Sequences: 1807
Number of extensions: 3329
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 48 (100.5 bits)